API Reference

Description of functions and the classes on which they are built

Functions

Functional wrappers of the classes below. These are the main tools of the API.

adata_query.fetch

data = fetch(
    adata: anndata.AnnData,
    key: str,
    groupby: Optional[str] = None,
    torch: bool = False,
    device: torch.device = autodevice.AutoDevice(),
    *args,
    **kwargs,
)

adata_query.format_data

data = format_data(
    data: Union[np.ndarray, torch.Tensor],
    torch: bool = False,
    device: torch.device = autodevice.AutoDevice(),
    *args,
    **kwargs,
)

adata_query.locate

attr_key = adata_query.locate(adata: anndata.AnnData, key: str)

Expand each function for a quick view. Click on the function titles for full documentation.

Classes

Everything related to the operational classes:

AnnDataFetcher

DataFormatter

AnnDataLocator